UNC surveillance report -

Contributors: Jeremy Wang, Alexander Rubinsteyn, Corbin Jones, Melissa Miller, Robert Hagan, Amy James Loftis, Amir Barzin, Susan Fiscus


Including samples through:

We are conducting ongoing surveillance of the SARS-CoV-2 genotypes circulating in central NC. We collect leftover material from nasopharyngeal swab samples that tested qPCR positive at UNC Hospitals. We performed whole-genome nanopore sequencing based on tiled PCR amplification targeting SARS-CoV-2 using all or a subset of ARTIC primers.

Contact: unc@cov2seq.org

Variant trends

Recent lineages

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